@ShaiCarmi Yes it is high for sure, like >99%. The thing I can't get my head around is that this has been reported for both technologies (e.g. here for microarray https://t.co/amoRUga71g). So what big-number stats effect can explain 45% false discovery
Technical Reproducibility of Genotyping SNP Arrays Used in Genome-Wide Association Studies http://t.co/30aZByN6
Technical Reproducibility of Genotyping SNP Arrays Used in Genome-Wide Association Studies http://t.co/30aZByN6
Technical Reproducibility of Genotyping SNP Arrays Used in Genome-Wide Association Studies http://t.co/30aZByN6
Technical Reproducibility of Genotyping SNP Arrays Used in Genome-Wide Association Studies http://t.co/30aZByN6