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Genome Wide Association Analysis of a Founder Population Identified TAF3 as a Gene for MCHC in Humans

Overview of attention for article published in PLOS ONE, July 2013
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Title
Genome Wide Association Analysis of a Founder Population Identified TAF3 as a Gene for MCHC in Humans
Published in
PLOS ONE, July 2013
DOI 10.1371/journal.pone.0069206
Pubmed ID
Authors

Giorgio Pistis, Shawntel U. Okonkwo, Michela Traglia, Cinzia Sala, So-Youn Shin, Corrado Masciullo, Iwan Buetti, Roberto Massacane, Massimo Mangino, Swee-Lay Thein, Timothy D. Spector, Santhi Ganesh, Nicola Pirastu, Paolo Gasparini, Nicole Soranzo, Clara Camaschella, Daniel Hart, Michael R. Green, Daniela Toniolo

Abstract

The red blood cell related traits are highly heritable but their genetics are poorly defined. Only 5-10% of the total observed variance is explained by the genetic loci found to date, suggesting that additional loci should be searched using approaches alternative to large meta analysis. GWAS (Genome Wide Association Study) for red blood cell traits in a founder population cohort from Northern Italy identified a new locus for mean corpuscular hemoglobin concentration (MCHC) in the TAF3 gene. The association was replicated in two cohorts (rs1887582, Pā€Š=ā€Š4.25E-09). TAF3 encodes a transcription cofactor that participates in core promoter recognition complex, and is involved in zebrafish and mouse erythropoiesis. We show here that TAF3 is required for transcription of the SPTA1 gene, encoding alpha spectrin, one of the proteins that link the plasma membrane to the actin cytoskeleton. Mutations in SPTA1 are responsible for hereditary spherocytosis, a monogenic disorder of MCHC, as well as for the normal MCHC level. Based on our results, we propose that TAF3 is required for normal erythropoiesis in human and that it might have a role in controlling the ratio between hemoglobin (Hb) and cell volume and in the dynamics of RBC maturation in healthy individuals. Finally, TAF3 represents a potential candidate or a modifier gene for disorders of red cell membrane.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 29 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 29 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 5 17%
Researcher 5 17%
Other 3 10%
Student > Bachelor 2 7%
Student > Doctoral Student 1 3%
Other 4 14%
Unknown 9 31%
Readers by discipline Count As %
Medicine and Dentistry 7 24%
Agricultural and Biological Sciences 5 17%
Biochemistry, Genetics and Molecular Biology 4 14%
Nursing and Health Professions 1 3%
Computer Science 1 3%
Other 1 3%
Unknown 10 34%