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Evaluation of MycAssay™ Aspergillus for Diagnosis of Invasive Pulmonary Aspergillosis in Patients without Hematological Cancer

Overview of attention for article published in PLOS ONE, April 2013
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Title
Evaluation of MycAssay™ Aspergillus for Diagnosis of Invasive Pulmonary Aspergillosis in Patients without Hematological Cancer
Published in
PLOS ONE, April 2013
DOI 10.1371/journal.pone.0061545
Pubmed ID
Authors

Jesús Guinea, Camilo Padilla, Pilar Escribano, Patricia Muñoz, Belén Padilla, Paloma Gijón, Emilio Bouza

Abstract

Methods based on real-time polymerase chain reaction (PCR) can speed up the diagnosis of invasive aspergillosis but are limited by a lack of standardization. We evaluated the commercially available MycAssay™ Aspergillus test for the diagnosis of invasive aspergillosis in patients without hematological cancer. We prospectively collected 322 lower respiratory tract samples (November 2009-January 2011) from 175 patients with lower respiratory tract infection and the following predisposing conditions: solid cancer (16.8%), cirrhosis (16.8%), corticosteroid therapy (71.7%), HIV infection (15.6%), chronic obstructive pulmonary disease (COPD, 52.6%), solid organ transplantation (kidney [1.2%], heart [3%], liver [4.6%]), or none (3.5%). Specimens were obtained when clinically indicated and analyzed in the microbiology laboratory. Aspergillus DNA was extracted and amplified by means of MycXtra® and MycAssay™ Aspergillus. Aspergillus spp. was isolated from 65 samples (31 patients). According to the European Organization for Research and Treatment of Cancer and Bulpa's criteria (for patients with COPD), 15 had probable invasive aspergillosis. MycAssay™ Aspergillus results were negative (n = 254), positive (n = 54), or indeterminate (n = 14). The sensitivity, specificity, positive predictive value, negative predictive value, and diagnostic odds ratio of the MycAssay™ (first sample/any sample) were 86.7/93, 87.6/82.4, 34.1/34.1, 92.2/100, and 48/68.75. The differences between the proportion of samples with positive PCR determinations (63%) and the proportion of samples with Aspergillus spp. isolation (75%) did not reach statistical significance (P = 0.112). The median time from sample culture to visualization of fungal growth was 3 days, compared with ∼4 hours for MycAssay™ Aspergillus PCR. MycAssay™ Aspergillus showed high sensitivity for the diagnosis of invasive aspergillosis in patients without hematological cancer. Sensitivity increased when multiple samples were used. Compared with fungal culture, PCR significantly reduced the time to diagnosis.

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Geographical breakdown

Country Count As %
United States 1 1%
Unknown 77 99%

Demographic breakdown

Readers by professional status Count As %
Student > Master 13 17%
Researcher 11 14%
Student > Ph. D. Student 7 9%
Student > Bachelor 7 9%
Other 5 6%
Other 15 19%
Unknown 20 26%
Readers by discipline Count As %
Medicine and Dentistry 30 38%
Biochemistry, Genetics and Molecular Biology 6 8%
Social Sciences 6 8%
Agricultural and Biological Sciences 4 5%
Immunology and Microbiology 4 5%
Other 3 4%
Unknown 25 32%