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Measuring Information-Transfer Delays

Overview of attention for article published in PLOS ONE, February 2013
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Title
Measuring Information-Transfer Delays
Published in
PLOS ONE, February 2013
DOI 10.1371/journal.pone.0055809
Pubmed ID
Authors

Michael Wibral, Nicolae Pampu, Viola Priesemann, Felix Siebenhühner, Hannes Seiwert, Michael Lindner, Joseph T. Lizier, Raul Vicente

Abstract

In complex networks such as gene networks, traffic systems or brain circuits it is important to understand how long it takes for the different parts of the network to effectively influence one another. In the brain, for example, axonal delays between brain areas can amount to several tens of milliseconds, adding an intrinsic component to any timing-based processing of information. Inferring neural interaction delays is thus needed to interpret the information transfer revealed by any analysis of directed interactions across brain structures. However, a robust estimation of interaction delays from neural activity faces several challenges if modeling assumptions on interaction mechanisms are wrong or cannot be made. Here, we propose a robust estimator for neuronal interaction delays rooted in an information-theoretic framework, which allows a model-free exploration of interactions. In particular, we extend transfer entropy to account for delayed source-target interactions, while crucially retaining the conditioning on the embedded target state at the immediately previous time step. We prove that this particular extension is indeed guaranteed to identify interaction delays between two coupled systems and is the only relevant option in keeping with Wiener's principle of causality. We demonstrate the performance of our approach in detecting interaction delays on finite data by numerical simulations of stochastic and deterministic processes, as well as on local field potential recordings. We also show the ability of the extended transfer entropy to detect the presence of multiple delays, as well as feedback loops. While evaluated on neuroscience data, we expect the estimator to be useful in other fields dealing with network dynamics.

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Geographical breakdown

Country Count As %
Germany 3 2%
United Kingdom 3 2%
Colombia 1 <1%
Hungary 1 <1%
France 1 <1%
Brazil 1 <1%
Sweden 1 <1%
Netherlands 1 <1%
Finland 1 <1%
Other 3 2%
Unknown 154 91%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 47 28%
Researcher 40 24%
Student > Master 20 12%
Student > Doctoral Student 10 6%
Student > Postgraduate 10 6%
Other 23 14%
Unknown 20 12%
Readers by discipline Count As %
Neuroscience 24 14%
Engineering 24 14%
Computer Science 23 14%
Agricultural and Biological Sciences 20 12%
Psychology 13 8%
Other 37 22%
Unknown 29 17%