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The Structure of the Karrikin-Insensitive Protein (KAI2) in Arabidopsis thaliana

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Title
The Structure of the Karrikin-Insensitive Protein (KAI2) in Arabidopsis thaliana
Published in
PLOS ONE, January 2013
DOI 10.1371/journal.pone.0054758
Pubmed ID
Authors

Rohan Bythell-Douglas, Mark T. Waters, Adrian Scaffidi, Gavin R. Flematti, Steven M. Smith, Charles S. Bond

Abstract

KARRIKIN INSENSITIVE 2 (KAI2) is an α/β hydrolase involved in seed germination and seedling development. It is essential for plant responses to karrikins, a class of butenolide compounds derived from burnt plant material that are structurally similar to strigolactone plant hormones. The mechanistic basis for the function of KAI2 in plant development remains unclear. We have determined the crystal structure of Arabidopsis thaliana KAI2 in space groups P2(1) 2(1) 2(1) (a =63.57 Å, b =66.26 Å, c =78.25 Å) and P2(1) (a =50.20 Å, b =56.04 Å, c =52.43 Å, β =116.12°) to 1.55 and 2.11 Å respectively. The catalytic residues are positioned within a large hydrophobic pocket similar to that of DAD2, a protein required for strigolactone response in Petunia hybrida. KAI2 possesses a second solvent-accessible pocket, adjacent to the active site cavity, which offers the possibility of allosteric regulation. The structure of KAI2 is consistent with its designation as a serine hydrolase, as well as previous data implicating the protein in karrikin and strigolactone signalling.

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Geographical breakdown

Country Count As %
Spain 1 1%
Unknown 94 99%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 21 22%
Researcher 18 19%
Student > Master 9 9%
Student > Bachelor 9 9%
Professor > Associate Professor 7 7%
Other 20 21%
Unknown 11 12%
Readers by discipline Count As %
Agricultural and Biological Sciences 58 61%
Biochemistry, Genetics and Molecular Biology 15 16%
Chemistry 4 4%
Environmental Science 3 3%
Unspecified 1 1%
Other 2 2%
Unknown 12 13%