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Bacterial Indicator of Agricultural Management for Soil under No-Till Crop Production

Overview of attention for article published in PLOS ONE, November 2012
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Title
Bacterial Indicator of Agricultural Management for Soil under No-Till Crop Production
Published in
PLOS ONE, November 2012
DOI 10.1371/journal.pone.0051075
Pubmed ID
Authors

Eva L. M. Figuerola, Leandro D. Guerrero, Silvina M. Rosa, Leandro Simonetti, Matías E. Duval, Juan A. Galantini, José C. Bedano, Luis G. Wall, Leonardo Erijman

Abstract

The rise in the world demand for food poses a challenge to our ability to sustain soil fertility and sustainability. The increasing use of no-till agriculture, adopted in many areas of the world as an alternative to conventional farming, may contribute to reduce the erosion of soils and the increase in the soil carbon pool. However, the advantages of no-till agriculture are jeopardized when its use is linked to the expansion of crop monoculture. The aim of this study was to survey bacterial communities to find indicators of soil quality related to contrasting agriculture management in soils under no-till farming. Four sites in production agriculture, with different soil properties, situated across a west-east transect in the most productive region in the Argentinean pampas, were taken as the basis for replication. Working definitions of Good no-till Agricultural Practices (GAP) and Poor no-till Agricultural Practices (PAP) were adopted for two distinct scenarios in terms of crop rotation, fertilization, agrochemicals use and pest control. Non-cultivated soils nearby the agricultural sites were taken as additional control treatments. Tag-encoded pyrosequencing was used to deeply sample the 16S rRNA gene from bacteria residing in soils corresponding to the three treatments at the four locations. Although bacterial communities as a whole appeared to be structured chiefly by a marked biogeographic provincialism, the distribution of a few taxa was shaped as well by environmental conditions related to agricultural management practices. A statistically supported approach was used to define candidates for management-indicator organisms, subsequently validated using quantitative PCR. We suggest that the ratio between the normalized abundance of a selected group of bacteria within the GP1 group of the phylum Acidobacteria and the genus Rubellimicrobium of the Alphaproteobacteria may serve as a potential management-indicator to discriminate between sustainable vs. non-sustainable agricultural practices in the Pampa region.

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Geographical breakdown

Country Count As %
Argentina 2 1%
Thailand 1 <1%
Belgium 1 <1%
Unknown 144 97%

Demographic breakdown

Readers by professional status Count As %
Researcher 37 25%
Student > Ph. D. Student 23 16%
Student > Doctoral Student 16 11%
Student > Bachelor 15 10%
Student > Master 12 8%
Other 26 18%
Unknown 19 13%
Readers by discipline Count As %
Agricultural and Biological Sciences 76 51%
Environmental Science 24 16%
Biochemistry, Genetics and Molecular Biology 7 5%
Engineering 4 3%
Veterinary Science and Veterinary Medicine 1 <1%
Other 7 5%
Unknown 29 20%