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Survey of Endosymbionts in the Diaphorina citri Metagenome and Assembly of a Wolbachia wDi Draft Genome

Overview of attention for article published in PLOS ONE, November 2012
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Title
Survey of Endosymbionts in the Diaphorina citri Metagenome and Assembly of a Wolbachia wDi Draft Genome
Published in
PLOS ONE, November 2012
DOI 10.1371/journal.pone.0050067
Pubmed ID
Authors

Surya Saha, Wayne B. Hunter, Justin Reese, J. Kent Morgan, Mizuri Marutani-Hert, Hong Huang, Magdalen Lindeberg

Abstract

Diaphorina citri (Hemiptera: Psyllidae), the Asian citrus psyllid, is the insect vector of Ca. Liberibacter asiaticus, the causal agent of citrus greening disease. Sequencing of the D. citri metagenome has been initiated to gain better understanding of the biology of this organism and the potential roles of its bacterial endosymbionts. To corroborate candidate endosymbionts previously identified by rDNA amplification, raw reads from the D. citri metagenome sequence were mapped to reference genome sequences. Results of the read mapping provided the most support for Wolbachia and an enteric bacterium most similar to Salmonella. Wolbachia-derived reads were extracted using the complete genome sequences for four Wolbachia strains. Reads were assembled into a draft genome sequence, and the annotation assessed for the presence of features potentially involved in host interaction. Genome alignment with the complete sequences reveals membership of Wolbachia wDi in supergroup B, further supported by phylogenetic analysis of FtsZ. FtsZ and Wsp phylogenies additionally indicate that the Wolbachia strain in the Florida D. citri isolate falls into a sub-clade of supergroup B, distinct from Wolbachia present in Chinese D. citri isolates, supporting the hypothesis that the D. citri introduced into Florida did not originate from China.

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Mendeley readers

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Geographical breakdown

Country Count As %
United States 3 3%
Germany 1 <1%
Brazil 1 <1%
United Kingdom 1 <1%
Czechia 1 <1%
Spain 1 <1%
Mexico 1 <1%
Unknown 104 92%

Demographic breakdown

Readers by professional status Count As %
Researcher 24 21%
Student > Ph. D. Student 22 19%
Student > Master 14 12%
Student > Bachelor 9 8%
Other 7 6%
Other 25 22%
Unknown 12 11%
Readers by discipline Count As %
Agricultural and Biological Sciences 70 62%
Biochemistry, Genetics and Molecular Biology 11 10%
Social Sciences 3 3%
Engineering 3 3%
Nursing and Health Professions 2 2%
Other 9 8%
Unknown 15 13%