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Similar Pathogen Targets in Arabidopsis thaliana and Homo sapiens Protein Networks

Overview of attention for article published in PLOS ONE, September 2012
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Title
Similar Pathogen Targets in Arabidopsis thaliana and Homo sapiens Protein Networks
Published in
PLOS ONE, September 2012
DOI 10.1371/journal.pone.0045154
Pubmed ID
Authors

Paulo Shakarian, J. Kenneth Wickiser

Abstract

We study the behavior of pathogens on host protein networks for humans and Arabidopsis - noting striking similarities. Specifically, we preform [Formula: see text]-shell decomposition analysis on these networks - which groups the proteins into various "shells" based on network structure. We observe that shells with a higher average degree are more highly targeted (with a power-law relationship) and that highly targeted nodes lie in shells closer to the inner-core of the network. Additionally, we also note that the inner core of the network is significantly under-targeted. We show that these core proteins may have a role in intra-cellular communication and hypothesize that they are less attacked to ensure survival of the host. This may explain why certain high-degree proteins are not significantly attacked.

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The data shown below were compiled from readership statistics for 6 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 6 100%

Demographic breakdown

Readers by professional status Count As %
Student > Doctoral Student 3 50%
Researcher 1 17%
Student > Postgraduate 1 17%
Student > Master 1 17%
Readers by discipline Count As %
Agricultural and Biological Sciences 5 83%
Pharmacology, Toxicology and Pharmaceutical Science 1 17%