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A 3-Year Study Reveals That Plant Growth Stage, Season and Field Site Affect Soil Fungal Communities while Cultivar and GM-Trait Have Minor Effects

Overview of attention for article published in PLOS ONE, April 2012
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Title
A 3-Year Study Reveals That Plant Growth Stage, Season and Field Site Affect Soil Fungal Communities while Cultivar and GM-Trait Have Minor Effects
Published in
PLOS ONE, April 2012
DOI 10.1371/journal.pone.0033819
Pubmed ID
Authors

Silja Emilia Hannula, Wietse de Boer, Johannes van Veen

Abstract

In this three year field study the impact of different potato (Solanum tuberosum L.) cultivars including a genetically modified (GM) amylopectin-accumulating potato line on rhizosphere fungal communities are investigated using molecular microbiological methods. The effects of growth stage of a plant, soil type and year on the rhizosphere fungi were included in this study. To compare the effects, one GM cultivar, the parental isoline, and four non-related cultivars were planted in the fields and analysed using T-RFLP on the basis of fungal phylum specific primers combined with multivariate statistical methods. Additionally, fungal biomass and some extracellular fungal enzymes (laccases, Mn-peroxidases and cellulases) were quantified in order to gain insight into the function of the fungal communities. Plant growth stage and year (and agricultural management) had the strongest effect on both diversity and function of the fungal communities while the GM-trait studied was the least explanatory factor. The impact of cultivar and soil type was intermediate. Occasional differences between cultivars, the amylopectin-accumulating potato line, and its parental variety were detected, but these differences were mostly transient in nature and detected either only in one soil, one growth stage or one year.

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Geographical breakdown

Country Count As %
United States 1 2%
Netherlands 1 2%
France 1 2%
Unknown 47 94%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 17 34%
Researcher 7 14%
Student > Master 5 10%
Student > Doctoral Student 3 6%
Librarian 3 6%
Other 11 22%
Unknown 4 8%
Readers by discipline Count As %
Agricultural and Biological Sciences 27 54%
Environmental Science 4 8%
Biochemistry, Genetics and Molecular Biology 4 8%
Earth and Planetary Sciences 2 4%
Chemistry 2 4%
Other 2 4%
Unknown 9 18%