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Species Delimitation in the Continental Forms of the Genus Epicrates (Serpentes, Boidae) Integrating Phylogenetics and Environmental Niche Models

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Title
Species Delimitation in the Continental Forms of the Genus Epicrates (Serpentes, Boidae) Integrating Phylogenetics and Environmental Niche Models
Published in
PLOS ONE, September 2011
DOI 10.1371/journal.pone.0022199
Pubmed ID
Authors

Paula C. Rivera, Valeria Di Cola, Juan J. Martínez, Cristina N. Gardenal, Margarita Chiaraviglio

Abstract

Until recently, the genus Epicrates (Boidae) presented only one continental species, Epicrates cenchria, distributed in Central and South America, but after a taxonomic revision using morphologic characters five species were recognized: E. cenchria, E. crassus, E. maurus, E. assisi, and E. alvarezi. We analyzed two independent data sets, environmental niche models and phylogeny based on molecular information, to explore species delimitation in the continental species of this genus. Our results indicated that the environmental requirements of the species are different; therefore there are not evidences of ecological interchangeability among them. There is a clear correlation between species distributions and the major biogeographic regions of Central and South America. Their overall distribution reveals that allopatry or parapatry is the general pattern. These evidences suggest that habitat isolation prevents or limits gene exchange among them. The phylogenetic reconstruction showed that the continental Epicrates are monophyletic, being E. alvarezi the sister species for the remaining two clades: E. crassus-E. assisi, and E. maurus-E. cenchria. The clade grouping the continental Epicrates is the sister taxon of the genus Eunectes and not of the Caribbean Epicrates clade, indicating that the genus is paraphyletic. There is a non-consistent pattern in niche evolution among continental Epicrates. On the contrary, a high variation and abrupt shifts in environmental variables are shown when ancestral character states were reconstructed on the sequence-based tree. The degree of genetic and ecological divergence among continental Epicrates and the phylogenetic analyses support the elevation to full species of E. cenchria, E. crassus, E. maurus, E. assisi, and E. alvarezi.

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Geographical breakdown

Country Count As %
Brazil 13 6%
France 3 1%
Mexico 2 <1%
Argentina 2 <1%
Réunion 1 <1%
United Kingdom 1 <1%
Switzerland 1 <1%
Hungary 1 <1%
China 1 <1%
Other 2 <1%
Unknown 181 87%

Demographic breakdown

Readers by professional status Count As %
Student > Master 40 19%
Researcher 34 16%
Student > Ph. D. Student 31 15%
Student > Bachelor 30 14%
Student > Doctoral Student 13 6%
Other 37 18%
Unknown 23 11%
Readers by discipline Count As %
Agricultural and Biological Sciences 144 69%
Environmental Science 19 9%
Biochemistry, Genetics and Molecular Biology 9 4%
Philosophy 1 <1%
Arts and Humanities 1 <1%
Other 7 3%
Unknown 27 13%