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Connecting a Connectome to Behavior: An Ensemble of Neuroanatomical Models of C. elegans Klinotaxis

Overview of attention for article published in PLoS Computational Biology, February 2013
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Title
Connecting a Connectome to Behavior: An Ensemble of Neuroanatomical Models of C. elegans Klinotaxis
Published in
PLoS Computational Biology, February 2013
DOI 10.1371/journal.pcbi.1002890
Pubmed ID
Authors

Eduardo J. Izquierdo, Randall D. Beer

Abstract

Increased efforts in the assembly and analysis of connectome data are providing new insights into the principles underlying the connectivity of neural circuits. However, despite these considerable advances in connectomics, neuroanatomical data must be integrated with neurophysiological and behavioral data in order to obtain a complete picture of neural function. Due to its nearly complete wiring diagram and large behavioral repertoire, the nematode worm Caenorhaditis elegans is an ideal organism in which to explore in detail this link between neural connectivity and behavior. In this paper, we develop a neuroanatomically-grounded model of salt klinotaxis, a form of chemotaxis in which changes in orientation are directed towards the source through gradual continual adjustments. We identify a minimal klinotaxis circuit by systematically searching the C. elegans connectome for pathways linking chemosensory neurons to neck motor neurons, and prune the resulting network based on both experimental considerations and several simplifying assumptions. We then use an evolutionary algorithm to find possible values for the unknown electrophsyiological parameters in the network such that the behavioral performance of the entire model is optimized to match that of the animal. Multiple runs of the evolutionary algorithm produce an ensemble of such models. We analyze in some detail the mechanisms by which one of the best evolved circuits operates and characterize the similarities and differences between this mechanism and other solutions in the ensemble. Finally, we propose a series of experiments to determine which of these alternatives the worm may be using.

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Geographical breakdown

Country Count As %
United States 9 5%
Portugal 2 1%
Netherlands 1 <1%
France 1 <1%
Hungary 1 <1%
Canada 1 <1%
United Kingdom 1 <1%
Japan 1 <1%
Spain 1 <1%
Other 0 0%
Unknown 182 91%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 64 32%
Researcher 40 20%
Student > Bachelor 28 14%
Student > Master 15 8%
Professor 12 6%
Other 27 14%
Unknown 14 7%
Readers by discipline Count As %
Agricultural and Biological Sciences 57 28%
Neuroscience 31 16%
Computer Science 21 11%
Engineering 17 9%
Physics and Astronomy 15 8%
Other 39 20%
Unknown 20 10%