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Coding and Decoding with Adapting Neurons: A Population Approach to the Peri-Stimulus Time Histogram

Overview of attention for article published in PLoS Computational Biology, October 2012
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Title
Coding and Decoding with Adapting Neurons: A Population Approach to the Peri-Stimulus Time Histogram
Published in
PLoS Computational Biology, October 2012
DOI 10.1371/journal.pcbi.1002711
Pubmed ID
Authors

Richard Naud, Wulfram Gerstner

Abstract

The response of a neuron to a time-dependent stimulus, as measured in a Peri-Stimulus-Time-Histogram (PSTH), exhibits an intricate temporal structure that reflects potential temporal coding principles. Here we analyze the encoding and decoding of PSTHs for spiking neurons with arbitrary refractoriness and adaptation. As a modeling framework, we use the spike response model, also known as the generalized linear neuron model. Because of refractoriness, the effect of the most recent spike on the spiking probability a few milliseconds later is very strong. The influence of the last spike needs therefore to be described with high precision, while the rest of the neuronal spiking history merely introduces an average self-inhibition or adaptation that depends on the expected number of past spikes but not on the exact spike timings. Based on these insights, we derive a 'quasi-renewal equation' which is shown to yield an excellent description of the firing rate of adapting neurons. We explore the domain of validity of the quasi-renewal equation and compare it with other rate equations for populations of spiking neurons. The problem of decoding the stimulus from the population response (or PSTH) is addressed analogously. We find that for small levels of activity and weak adaptation, a simple accumulator of the past activity is sufficient to decode the original input, but when refractory effects become large decoding becomes a non-linear function of the past activity. The results presented here can be applied to the mean-field analysis of coupled neuron networks, but also to arbitrary point processes with negative self-interaction.

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Geographical breakdown

Country Count As %
United States 3 3%
Germany 2 2%
United Kingdom 2 2%
France 1 <1%
Canada 1 <1%
Switzerland 1 <1%
Unknown 106 91%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 30 26%
Researcher 28 24%
Student > Master 15 13%
Professor > Associate Professor 9 8%
Student > Bachelor 8 7%
Other 18 16%
Unknown 8 7%
Readers by discipline Count As %
Agricultural and Biological Sciences 34 29%
Neuroscience 18 16%
Physics and Astronomy 13 11%
Engineering 12 10%
Computer Science 9 8%
Other 20 17%
Unknown 10 9%