@drkahaynes @chrstn_e Sunduz Keles has several interesting papers about calling peaks in non-uniquely mappable regions. E.g. https://t.co/8LBAj44YpL We’ve reimplemented some - would be happy to chat if you like.
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RT @tangming2005: @NDescostes have not tried yet, but I see https://t.co/ZNyNEMauwC would be glad to see a paper on ChIPseq on repetitive r…
30,185 followers
@NDescostes have not tried yet, but I see https://t.co/ZNyNEMauwC would be glad to see a paper on ChIPseq on repetitive regions
30,185 followers
@ChiragNepal @ChIP_seq @pundhir_sachin @AltunaAkalin @generegulation I usually remove those. I saw papers use those reads info https://t.co/ZNyNEMs5Vc
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@notSoJunkDNA @stephenfloor @michaelhoffman @jsamsoondar Here is a paper https://t.co/HLqmu4UWKd and think more is done since then
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Discovering Transcription Factor Binding Sites in Highly Repetitive Regions of Genomes, Analysis of ChIP-Seq Data http://bit.ly/pnEODW